Metabolomics & metabolites engineering in plant breeding
Mahboubeh Ashnavar; Azim Ghasemnezhad; Mostafa Khoshhal Sarmast; Kamran Rahnama
Abstract
Plants are important parts of our diet; which, in addition to the primary metabolites, also produce a wide range of secondary metabolites. Endophytic fungi are among these microorganisms that not only do not cause infection and disease in the host plant but also play a role in the production or increase ...
Read More
Plants are important parts of our diet; which, in addition to the primary metabolites, also produce a wide range of secondary metabolites. Endophytic fungi are among these microorganisms that not only do not cause infection and disease in the host plant but also play a role in the production or increase of some secondary metabolites and defense responses to biotic and abiotic stresses in the plant. Yew is one of the native trees of Iran and has medicinal value and has important fungal endophytes. Isolation and characterization of endophytic fungi in this plant can be important in order to discover new species with the potential to produce taxol. This study was carried out to isolate and identify molecularly and morphologically some fungal endophytes in the laboratory. In order to investigate the presence of ITS gene in fungi, ITS5 and ITS4 specific primers were used. 81 endophytic fungi were extracted from yew seedlings and eight samples were selected for molecular tests. The results of examining the presence of the ITS showed that all the extracted fungi gave a band in the desired region. Based on molecular and morphological studies, eight strains of identified endophytic fungi belonged to the genera Purpureocillium, Akanthomyces, Fusarium, Phomopsis and Colletotrichum. Therefore, the identification of more endophytic species can help to discover useful microorganisms in the production of secondary metabolites such as taxol.
Metabolomics & metabolites engineering in plant breeding
Saeed Mollaei; Poopak Farnia; Jalaledin Ghanavi; Mohammad Majidi
Abstract
Herbal plants play significant roles in the treatment of diseases and development of novel drugs. Salsola vermiculata is an annual plant which is broadly distributed in the southwest Asia, and used for the treatment of stomach disorders. This present study aimed at identifying and comparing the metabolic ...
Read More
Herbal plants play significant roles in the treatment of diseases and development of novel drugs. Salsola vermiculata is an annual plant which is broadly distributed in the southwest Asia, and used for the treatment of stomach disorders. This present study aimed at identifying and comparing the metabolic profiles of different parts of S. vermiculata and evaluating the inhibitory potential of their extracts and fractions against acetylcholinesterase and α-glucosidase. LC-ESI-MS, GC, and GC-MS analytical methods were employed for metabolite profiling of the extracts, and their fractions. The inhibitory activities were determined by microplate reader-based colorimetric methods. 44 metabolites were identified in different parts of S. vermiculata. In roots, vanillic acid, rutin, salsoline, salsoline A, palmitic acid, oleic acid, linoleic acid, cumin aldehyde, and carvone; in seeds, vanillic acid, salsoline A, palmitic acid, oleic acid, linoleic acid, carvone, and β-caryophyllene; in leaves, gallic acid, vanillic acid, caffeic acid, rosmaric acid, rutin, quercetin, limonene, and carvone, and in flowers, gallic acid, vanillic acid, cinnamic acid, rosmaric acid, rutin, kaempferol, limonene, linalool, and carvone were reported as major components. According to the inhibitory activities results, the ethyl acetate fractions of leaves and the aqueous-acid fraction of roots displayed the highest inhibitory activity against acetylcholinesterase (IC50: 17.24 µg/mL), and α-glucosidase (IC50: 62.37 µg/mL), respectively. Finally, the leaves and roots of S. vermiculata are rich of phenolic and alkaloid compounds and the findings of this study describe them as a promising acetylcholinesterase and α-glucosidase inhibitors, and therefore, can be utilized for the development of new drugs.
Metabolomics & metabolites engineering in plant breeding
Mahsa Montazeri; Ali Pakdin-Parizi; Hamid Najafi-Zarrini; Mohammad Azadbakht; Ghorbanali Nematzadeh; Zahra Gholami
Abstract
Hypericum perforatum is a medicinal plant which Hypericin, Hyperforin and phenolic compounds are its active secondary metabolites. Hairy root induction by Agrobacterium rhizogenes in this plant is difficult and has low efficiency. In the present study two inoculation methods, immersion in bacterial suspension ...
Read More
Hypericum perforatum is a medicinal plant which Hypericin, Hyperforin and phenolic compounds are its active secondary metabolites. Hairy root induction by Agrobacterium rhizogenes in this plant is difficult and has low efficiency. In the present study two inoculation methods, immersion in bacterial suspension and direct injection of A. rhizogenes has been compared. For this purpose, the best conditions for H. perforatum hairy root induction including A. rhizogenes strains (A4, LBA9402, NCPPB2656), plant explants (Stem, Apical bud, leaves), co-cultivation media (MS, ½MS, B5, and ½B5) and Acetosyringone (AS) concentration (0 and 100 µM) were specified and used for comparative analysis. It was found that strain A4, Stem explants, ½MS co-cultivation medium without AS constitute the best conditions for hairy root induction of H. perforatum. Transgenic nature of the potential hairy roots was confirmed using PCR and specific rolB and rolC genes primers. The results showed that the efficiency of applying direct injection method is four times higher than immersion in bacterial suspension in H. perforatum hairy root induction. In general, the results indicate that direct injection can be the method of choice to successful hairy root induction in H. perforatum.
Metabolomics & metabolites engineering in plant breeding
Neda Tariverdizadeh; Mehdi Mohebodini; Esmaeil Chamani; Asghar Ebadi
Abstract
Fenugreek(Trigonella foenum-graecum L.) is a rich source of important medicinal metabolites. This plant belongs to the Fabaceae family. Induced hairy roots by Agrobacterium rhizogenes are a suitable tissue for the production of secondary metabolites, due to the stability and high production of roots ...
Read More
Fenugreek(Trigonella foenum-graecum L.) is a rich source of important medicinal metabolites. This plant belongs to the Fabaceae family. Induced hairy roots by Agrobacterium rhizogenes are a suitable tissue for the production of secondary metabolites, due to the stability and high production of roots without phytohormone in a short time. Different strains of Agrobacterium rhizogenes (A4, ATCC11325 and ATCC15834) were evaluated for induction of transformed hairy roots in T. foenum-graecum L. using seedling explants. The application of hairy root culture may become an alternative method for increase secondary metabolites. Transgenic status of the roots was confirmed by PCR using rolB specific primers. All of the A. rhizogenes strains led to hairy roots induction. The maximum frequency of transformation (97.87%) was obtained using A4 strain in 7-days-old seedling. The 7-days-old explants were inoculated using A4 strain result in highest fresh (0.166 g) and dry (0.080 g) weight of roots. The explants were inoculated by ATCC11325 strain produced hairy roots with highest amount of total phenol (8.113 mg/g DW) and flavonoid content (3.215 µg/g DW).
Metabolomics & metabolites engineering in plant breeding
Mehdi Arefrad; Ghorbanali Nematzadeh; Nadali Babaian Jelodar; Seyyed Kamal Kazemitabar
Abstract
Gamma irradiation was used at different doses (80, 160 and 240 Gy) on Glycine Max (L.) Merrill cv. Hill homogenous seeds. A single suitable M2 plant was selected and evaluated at M3 and M4 along with its parent and three other varieties as control in RCBD experiment in Sari Agricultural Sciences and ...
Read More
Gamma irradiation was used at different doses (80, 160 and 240 Gy) on Glycine Max (L.) Merrill cv. Hill homogenous seeds. A single suitable M2 plant was selected and evaluated at M3 and M4 along with its parent and three other varieties as control in RCBD experiment in Sari Agricultural Sciences and Natural Resources University’s experimental field. M-80-709 and M-160-3429 mutant lines were significantly shorter (55.05 and 72.04 cm respectively). Their branch numbers were however significantly more (8.70 and 11.53 respectively) compared to the parent cultivar (80.82 cm and 6.10 respectively) and other genotypes (p≤0.05), when calculated on per plant basis. Besides, the M-160-3429 was characterized by highest grain yield and oil content (38.25 g and 19.22% respectively), in compare with its parent (12.73 g and 19.09% respectively) and all others control cultivars (p≤0.05). The M-160-3429 mutant line with high grain yield and oil content accompanied with some other favorite morphological traits can be considered as a new promising line of soybean for future studies. Results from this study suggested that mutation breeding procedures at the ranges of 80 to 160 Gy is a capable method for breeding higher grain yield including increasing the oil content as well.